R and Bioconductor pakages in bioinformatics

Bioinformatics with R Phone: (434) 924-8517 E-mail: shcho at virginia.edu
Special Lecture #2 Preparation - R, Bioconductor and Installation of R Packages Lecture - from Preprocessing to Annotation R script file demonstrated in the lecture Source code NOTE: getwd() - check your working directory if source("Source.R") fails. "Source.R" should be in the working directory. Otherwise, copy functions in the source file and paste in the R window! Interactive Annotation HTML Table (LIMMA) Interactive Annotation HTML Table (LPE) Reference Books Bioinformatics and Computational Biology Solutions Using R and Bioconductor (2005) R Graphics by Paul Murrell (2005) Useful Links The R Project for Statistical Computing The R Manuals Related Projects ( Emacs Speaks Statistics (ESS) and The R Graph Gallery ) Bioconductor Bioconductor Workshops and Courses BiocViews